Postdoc position – Multi-disciplinary application of data science approaches to investigate autoimmune thyroid disease in precision medicine

12 Jan 2024
Job Information

Organisation/Company

University of Copenhagen

Department

Center for Health Data Science

Research Field

All

Researcher Profile

First Stage Researcher (R1)
Recognised Researcher (R2)

Country

Denmark

Application Deadline

5 Feb 2024 - 23:59 (Europe/Copenhagen)

Type of Contract

Temporary

Job Status

Full-time

Hours Per Week

37

Offer Starting Date

1 Apr 2024

Is the job funded through the EU Research Framework Programme?

Not funded by an EU programme

Is the Job related to staff position within a Research Infrastructure?

No

Offer Description

The Center for Health Data Science (HeaDS) at the Faculty of Health and Medical Sciences,
University of Copenhagen, is offering a postdoc position for 2 years in multi-disciplinary application of
data science approaches to investigate autoimmune thyroid disease (AITD) and co-occurring
conditions.

Starting date is expected to be 1st April 2024, or after agreement.

Center for Health Science Data
The Center for Health Data Science (HeaDS) is a young and dynamic center at the Faculty of
Health and Medical Sciences, which is a hub for data science research at the Faculty and
offers support to other research groups. Around 20 top researchers/research groups are
members of the Center, and we aim to establish more groups within the Center and create a
world-class research environment for health data science with close links to the many
experimental and clinical groups at the Faculty. HeaDS is located at the Panum Institute. The
project will be in the group of Assistant Professor Tugce Karaderi.

Job Description
The project will focus on the application of state-of-the art data science approaches to study
the genomics, epidemiology and pathophysiology of AITD, which is one of the most
common endocrine conditions worldwide. Having AITD increases the risk for adverse
cardiovascular, metabolic, psychological, reproductive conditions as well as thyroid cancer
and other immune-mediated diseases, while affecting the quality of life of the patients. We
will use a multi-disciplinary and integrative approach combining various data types. The
project will (1) define disease co-morbidities and patient profiles in multiple large datasets
such as the Danish registries involving longitudinal analyses, and (2) investigate the
genomics of AITD and its co-morbidities to more precisely understand the relevant risk
factors and biological mechanisms, and hence, offer novel approaches for more personalized
healthcare to the patients, most of whom require life-long treatment, as well as to the
individuals at risk.

We have a diverse and inclusive research environment with local and international
collaborations. We highly value teamwork among the members of the research group and the
center.

Required qualifications:
We are looking for a highly motivated and enthusiastic scientist with the following
competencies and experience:

• A PhD degree in Bioinformatics, Genomics, Computer Science, Mathematics/Statistics, Physics, Engineering or similar.
• Strong programming experience in R and/or Python.
• Either strong experience with genomic epidemiology or with deep learning (e.g.Pytorch or similar).
• Experience with epidemiology and/or biostatistics.
• Experience with the application of epidemiological and/or machine learning approaches in large biological/medical datasets.
• Proficient communication skills and ability to work in teams.
• Excellent command of English (written and oral communication).

You must have a passion for medical applications of data science. Experience in
bioinformatics in general, a good understanding of epidemiology and biostatistics as well as
multi-omics datasets and machine learning will be considered advantageous.

Your key tasks would be:

• Carry through an independent research project under supervision.
• Write scientific articles on the grounds of the research project.
• Perform teaching or other types of dissemination related to the research project.
• Participate in national and international conferences and scientific meetings.

Key criteria for the assessment of applicants:

• Professional qualifications relevant to the position.
• Relevant work experience.
• Previous publications.
• Other professional activities.
• Language skills.

Terms of employment
The average weekly working hours are 37 hours per week.

The position is a fixed-term position limited to a period of 2 years. The starting date is 1st
April 2024 or after agreement.

Salary, pension and other conditions of employment are set in accordance with the
Agreement between the Ministry of Taxation and AC (Danish Confederation of Professional
Associations) or other relevant organisation. Currently, the monthly salary starts at 36,412
DKK/approx. 4,882 EUR (October 2023 level).

Foreign and Danish applicants may be eligible for tax reductions, if they hold a PhD degree
and have not lived in Denmark the last 10 years.

The position is covered by the Job Structure for Academic Staff at Universities 2020.

Application Procedure:
Your online application must be submitted in English by clicking ‘Apply now’ below. Please
note that only *online* applications submitted via the University of Copenhagen application
portal will be accepted. Furthermore, your application must include the following
documents/attachments – all in PDF format:

• Cover Letter detailing your motivation and background for applying (max. one page).
• Make sure to include a description for why this particular research project is interesting for you.
• CV incl. education, work/research experience, language skills and other skills relevant for the position.
• A certified/signed copy of a) PhD certificate and b) Master of Science certificate. If the PhD is not completed, a written statement from the supervisor will do.
• Other information for consideration, e.g. list of publications and/or manuscripts (if any), peer reviewed and others
• Minimum one letter of recommendation
• Possible references (with contact details – email and telephone numbers)

The closing date for applications is 23.59 pm, 05 February 2024. We reserve the right not
to consider material received after the deadline, and not to consider applications that do not
live up to the abovementioned requirements.

The further process
After the expiry of the deadline for applications, the authorized recruitment manager selects
applicants for assessment on the advice of the Appointments Committee. All applicants are
then immediately notified whether their application has been passed for assessment. An
expert assessment committee is appointed in order to make an assessment of the selected
applicants for the specific post. Selected applicants are notified of the composition of the
committee and each applicant has the opportunity to comment on the part of the assessment
that relates to the applicant him/herself.

You can read about the recruitment process at:
https://employment.ku.dk/faculty/recruitment-process/

Please note that the applicant will be contacted if the assessment committee requires further
documentation.

The applicant will be assessed according to the Ministerial Order no. 242 of 13 March 2012 on
the Appointment of Academic Staff at Universities.

Read about the recruitment process.

The main criteria for selection will be the candidate’s research potential and the above-
mentioned skills.

Interviews are expected to be held in week 07

Questions:
For specific information about the position, please contact Assistant Professor Tugce Karaderi,
[email protected] . Any questions regarding the application process or administrative
queries of any kind should be directed to HR, [email protected] .

For more information on working and living in Denmark: https://ism.ku.dk/ , and
Working at the University of Copenhagen – University of Copenhagen (ku.dk)

The Faculty of Health and Medical Sciences comprises approximately 7500 students, 1500
PhD students and 3200 employees. The Faculty advances the field of health sciences through
its core activities: research, teaching, knowledge sharing and communication. With basic
research fields ranging from molecular studies to studies of society, the Faculty contributes
to a healthy future through its graduates, research findings and inventions benefitting patients
and the community. The University of Copenhagen wishes to reflect the surrounding
community and invites all regardless of personal background to apply for the position.

APPLY NOW

Part of the International Alliance of Research Universities (IARU), and among Europe’s top-ranking universities, the University of Copenhagen promotes research and teaching of the highest international standard. Rich in tradition and modern in outlook, the University gives students and staff the opportunity to cultivate their talent in an ambitious and informal environment. An effective organisation – with good working conditions and a collaborative work culture – creates the ideal framework for a successful academic career.

Info

Application deadline: 05-02-2024

Employment start: 01-04-2024

Working hours: Full time

Department/Location: Center for Health Data Science

Requirements

Research Field

All

Education Level

PhD or equivalent

Languages

ENGLISH

Level

Excellent

Additional Information

Website for additional job details

https://employment.ku.dk/faculty/?show=160906

Work Location(s)

Number of offers available

1

Company/Institute

University of Copenhagen, Faculty of Health and Medical Sciences, Center for Health Data Science

Country

Denmark

State/Province

Copenhagen

City

Copenhagen

Geofield

Where to apply

Website

https://employment.ku.dk/faculty/?show=160906

Contact

City

Copenhagen

Website

https://employment.ku.dk/faculty/?show=160906

E-Mail

[email protected]

STATUS: EXPIRED