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them for next-generation sequencing (NGS) compatible experiments. Designs, implements, and operates bioinformatics pipelines using existing analytical tools for NGS applications. Applies intellectual
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-generation sequencing (NGS) compatible experiments. Designs, implements, and operates bioinformatics pipelines using existing analytical tools for NGS applications. Applies intellectual curiosity and passion
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experiments, such as cell culture, Western blotting, qRT-PCR, and flow cytometry. Collect and prepare samples for next-generation sequencing (NGS). Participate in special projects as assigned by the Principal
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University of California San Diego - Ganesan Lab | Mision de San Diego de Alcala, Baja California | Mexico | 2 months ago
are desirable Publications to review: 1. Upadhye A, Meza Landeros KE, Ramírez-Suástegui C, Schmiedel BJ, Woo E, Chee SJ, Malicki D, Coufal NG, Gonda D, Levy ML, Greenbaum JA, Seumois G, Crawford J, Roberts WD
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preparation protocols for NGS and Oxford Nanopore sequencing, organising, recording and overseeing the handling of biological samples, performing preliminary analysis and interpretation of sequencing data
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in virology, microbiology, genomics, molecular biology, or related fields. Strong molecular biology experience, including RT-qPCR, ddPCR, NGS library preparation, nucleic acid extraction, or related
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required. Preferred Qualifications Experience in Neuroscience field is a plus. Additional desired (but not required) skills: gene editing, NGS technologies such as RNAseq, and experience working with RNA
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), NGS library preparation and Illumina sequencing Experience with the analysis of large-scale NGS data (bioinformatics) Demonstrated proficiency in bioinformatic analyses in R, Python or similar
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required: Functional genomics and pooled screening technologies CRISPR knockout, CRISPRa/i, or base-editing platforms NGS library preparation and sequencing methods, including: ATAC-seq CUT&RUN CUT&Tag RNA
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, genetic variation, and viral evolution. Genomics & Bioinformatics: Viral genome-based evolutionary analysis, Linux/HPC-based analysis, and NGS workflow development (e.g., Snakemake, Bash). Key