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investigating the relationship between the human-associated microbiome, diet and cancer outcomes. Working across prospective clinical cohorts, biospecimens, shotgun metagenomics and large public datasets
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for molecular community analysis, genome sequencing and metagenomics. The candidate should be a talented marine microbiologist with experience working with marine microbes and field experience. Responsibilities
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for metagenomics, including different approaches to sampling and target enrichment, evidenced through authorship of published research articles and/or protocols. They will also have experience in bioinformatics
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, including analysis of genomic/metagenomic/transcriptomic data, would be an advantage. Experience with R, Python, Linux/Unix, sequence-analysis tools, or biological databases is an advantage. Good analytical
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enrichment NGS, metagenomic NGS. Participating in studies to characterize assay performance, including analytical sensitivity, reproducibility, inclusivity, and other relevant performance characteristics
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, metagenomic analyses or associated tools for studying infectious diseases. Apply and integrate the tools to jointly analyse host immune responses and virome composition, aiming to characterise infection types
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of the Principal Investigator or his/her designate, including but not limited to the following: - Develop and improve framework of virome analyses, transcriptomic data analyses, metagenomic analyses or associated
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molecular and sequencing-based methods (qPCR, Sanger sequencing, NGS metagenomics) to detect, quantify, and characterize known and novel honey bee pathogens. Apply classical microbiological techniques
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develop methods for multi-omic data integration, including metagenomic and immune-profiling data Interpret findings within epidemiologic and biological frameworks Lead first-author manuscripts and co-author
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scientific research regarding the genomics and metagenomics of marine planktonic organisms, - experience in the bioinformatic processing and analysis of molecular data from planktonic organisms, - experience