About the lab
The Data Mining and Modeling for Biomedicine group (headed by Yvan Saeys) at the VIB Center for Inflammation Research and Ghent University is located in the historical city of Ghent, Belgium. The Saeys lab is at the forefront of computational method development in single-cell omics and has a longstanding collaboration with many wet labs in immunology, oncology, and plant biology. Recently, the lab has started a single-cell facility with advanced access to the newest single-cell multi-omics technologies (scRNA-seq, scATAC-seq, CITE-seq, and spatial proteomics and transcriptomics). A major focus of the lab is to model the dynamics of biological systems and characterize their underlying gene regulatory networks. To this end, the lab develops new computational machine learning methods to improve the current state-of-the-art.
Description
The VIB-UGent Center for Inflammation Research (IRC) aims at unravelling the mechanisms of immunity and inflammation for better prevention and therapy of human chronic disease. Several high-end core facilities support and improve our research activities: microscopy, flow cytometry, transgenesis, cell culture, recombinant protein technology, single cell. For more information, please visit: https://www.irc.ugent.be
The University of Ghent is a sustainable, family-friendly organization, which invests in its employees’ growth. We encourage diversity and attach great importance to an inclusive working environment and equal opportunities, regardless of gender identity, disability, race, ethnicity, religion or belief, sexual orientation, or age. We encourage people from diverse backgrounds and with diverse characteristics to apply.
The successful candidate will be responsible for developing innovative data visualization solutions, including web-based data visualization portals, automated and scalable pipelines for data science, and maintenance of the software repositories and tools developed by the labs of Yvan Saeys at the VIB Center for Inflammation Research and Bert De Rybel at the VIB Center of Plant Systems Biology.
Profile
- Bachelor in computer science, informatics, or software development
- Solid programming experience is required (Python, Java, Javascript).
- Hands-on experience with Linux/Unix environments
- Good working knowledge of relational databases and SQL
- Knowledge of web development technologies (PHP, HTML, JavaScript, CSS)
- Experience with virtualization technologies (e.g. Docker, Singularity)
- Experience with workflow technologies (e.g. Nextflow)
- Experience with large scale computing/cluster computing/big data technologies is a plus
- Experience with visualization technologies is a plus (e.g. D3)
We offer
- A job in a stimulating international research environment that contributes to life science research at the highest standards
- A flexible working environment
- Competitive salary and benefits
Starting date: as soon as possible
How to apply?
Please complete the online application procedure and include a detailed CV, two reference letters, and a motivation letter.
For more information: [email protected]
Similar Positions
-
Bioinformaticians Biodiversity Cell Atlas Database, Centre for Genomic Regulation, Spain, about 22 hours ago
The Institute The Centre for Genomic Regulation (CRG) is an international biomedical research institute of excellence, based in Barcelona, Spain, with more than 400 scientists from 44 countries. T...
-
Postdoc/Assistant Professor , Institute of Fundamental Technological Research Polish Academy of Sciences, Poland, 14 days ago
10 Apr 2024 Job Information Organisation/Company Institute of Fundamental Technological Research Polish Academy of Sciences Department Department of Biosystems and Soft Matter Research Field Biolo...
-
Research Assistent: Exploring The Role Of Cell Size On Aging Of Human Hematopoietic Stem Cells, Karolinska Institutet, Sweden, 2 days ago
Do you want to contribute to top quality medical research? The failure to regenerate tissue with age is a major health issue. A contributor to this decline is the loss of stem cell function. Despi...
-
Qc Associate Ii Gmp Manufacturing, City of Hope, United States, about 14 hours ago
Join the forefront of groundbreaking research at the Beckman Research Institute of City of Hope , where we're changing lives and making a real difference in the fight against cancer, diabetes, and...
-
Research Associate Ii T Cell Therapeutics Research Laboratory, City of Hope, United States, about 14 hours ago
Thank you for your interest. Please note, the purpose of this posting is to recruit for on-going and future positions. Join the forefront of groundbreaking research at the Beckman Research Instit...
-
Research Specialist In Chromosome Biology, Karolinska Institutet, Sweden, 6 days ago
Do you want to contribute to improving human health? TheBaranello Lab: Drawing from our expertise in the fields of topoisomerase and cancer biology, we aim to answer fundamental questions about ho...