Postdoc on EV-mediated CRISPR-Cas9 delivery

3 May 2024
Job Information

Organisation/Company

Utrecht University

Research Field

Physics

Researcher Profile

Recognised Researcher (R2)

Country

Netherlands

Application Deadline

17 Jun 2024 - 21:59 (UTC)

Type of Contract

Temporary

Job Status

Not Applicable

Hours Per Week

40.0

Is the job funded through the EU Research Framework Programme?

Not funded by an EU programme

Is the Job related to staff position within a Research Infrastructure?

No

Offer Description

CRISPR-Cas9 can be employed to create dsDNA breaks, generate precise mutations, or incorporate specific sequences, regulate RNA transcription. One major hurdle in the development of Cas9-based therapies is the intracellular delivery of Cas9-sgRNA complexes. To address this challenge, your project will focus on the development of extracellular vesicle-mediated strategies for CRISPR-Cas9 delivery, and apply these strategies to integrate DNA sequences into target cells.

Your job
Over the last decade, CRISPR/Cas9-based techniques have been developed for various genomic engineering strategies in eukaryotic cells. Using single guide RNAs (sgRNA) containing specific targeting sequences, Cas9 can target precise genomic locations. Thus, CRISPR/Cas9-based techniques are of substantial interest for the development of novel therapies to treat genetic diseases. Moreover, as they can be targeted to precise genomic targets with high specificity, they have considerable therapeutic potential for currently “un-druggable” pathologies. Unfortunately, one of the major hurdles in the development of CRISPR/Cas9-based therapies is the intracellular delivery of Cas9-sgRNA complexes. Cas9-sgRNA complexes are unable to cross the cell membrane due to their large size, as well as their negative charge. Moreover, Cas9-sgRNA complexes need to be shielded from opsonization and degradation in circulation, do to their immunogenicity. Your project will focus on the development of extracellular vesicle (EV)-mediated strategies for CRISPR/Cas9 delivery to address these challenges.

Under the combined supervision of Dr Olivier de Jong (UU) and Dr Pieter Vader (UMCU) you will develop and optimise extracellular vesicle-mediated loading and delivery strategies of CRISPR-Cas9 ribonucleoprotein (RNP) complexes and DNA templates and study the uptake pathways and kinetics in target cells. As a functional readout, the engineered EVs will be studied for their efficiency in genomic engineering based on homology-independent targeted insertion (HITI) and homology-directed repair (HDR) pathways. You will design and test fusion proteins through conventional cloning techniques in DNA plasmids. These fusion proteins will consist of EV-enriched proteins, Cas9, and previously confirmed cleavable linker sequences. These plasmids will then be transfected into EV-producing cells to test their efficacy in Cas9 loading and delivery. Initial DNA templates will encode fluorescent (eGFP) reporter genes and will be tested on various cell lines. If successful, DNA sequences of CAR-T cell receptors will be loaded into EVs and delivered to various relevant cell types, including Jurkat cells and PBMC-derived T-cells. To gain a better understanding of the cellular processes that play a role in EV-mediated cargo delivery, cellular uptake, intracellular trafficking, and delivery will be studied using confocal microscopy. Experimental work will be performed at the department of Pharmaceutics at Utrecht University, as well as at the CDL Research department at the University Medical Center.

This project is funded by the Eurostars funding programme, and this postdoctoral research position will be part of a collaboration between various academic partners (Utrecht University, dept. of Pharmaceutics; University Medical Center Utrecht, CDL Research dept.) and industrial partners (ExoVectory and EVerZom). The goal of this consortium is to combine the expertise and technologies of the consortium members to develop novel strategies for EV-mediated delivery and genomic integration of DNA sequences using CRISPR-Cas9. These expertises consist of EV-mediated Cas9 delivery (UU), EV uptake and trafficking (UMCU), DNA loading and delivery (ExoVectory), and up- and downstream processing for scalable EV production (EVerZom), respectively.

Requirements
Specific Requirements

We are looking for a candidate who meets (several of) the following requirements:

• a PhD in the field of Biology, Biomedical Sciences, Pharmaceutical Sciences, or related fields (or close to graduation);
• a background in at least one of the following areas: CRISPR-Cas, extracellular vesicles, cell biology, cloning / protein engineering, or virology;
• preferably experience with cell culture and analysis (e.g. Western Blot, Microscopy, Flow Cytometry, and/or qPCR);
• excellent communicative skills in English, both in writing and speech;
• excited to collaborate with both academic and industrial research partners.

Additional Information
Benefits

We offer:

• a position for 1 year, with an option to extend for an additional 1.5 years (2.5 years total);
• a working week of 38-40 hours and a gross monthly salary between €3,877 to €4,036 in the case of full-time employment (salary scale 10.4-10.5 under the Collective Labour Agreement for Dutch Universities (CAO NU);
• 8% holiday pay and 8.3% year-end bonus;
• a pension scheme, partially paid parental leave and flexible terms of employment based on the CAO NU.

In addition to the terms of employment laid down in the CAO NU, Utrecht University has a number of schemes and facilities of its own for employees. This includes schemes facilitating professional development , leave schemes and schemes for sports and cultural activities , as well as discounts on software and other IT products. We also offer access to additional employee benefits through our Terms of Employment Options Model. In this way, we encourage our employees to continue to invest in their growth. For more information, please visit Working at Utrecht University .

Selection process

As Utrecht University, we want to be a home for everyone. We value staff with diverse backgrounds, perspectives and identities, including cultural, religious or ethnic background, gender, sexual orientation, disability or age. We strive to create a safe and inclusive environment in which everyone can flourish and contribute.

If you are enthusiastic about this position, just apply via the 'apply now' button! Please enclose:

• your letter of motivation;
• your curriculum vitae;
• the names, telephone numbers, and email addresses of at least two referees;
• a copy of your PhD certificate, or a letter from your university stating when your defence will take place.

If this specific opportunity isn’t for you, but you know someone else who may be interested, please forward this vacancy to them.

Additional comments

For more information, please contact Dr Olivier de Jong at [email protected] and/or Dr Pieter Vader at [email protected] .

Do you have a question about the application procedure? Please send an email to [email protected] .

Website for additional job details

https://www.academictransfer.com/341089/

Work Location(s)

Number of offers available

1

Company/Institute

Universiteit Utrecht

Country

Netherlands

City

Utrecht

Postal Code

3584CG

Street

Universiteitsweg 99

Geofield

Where to apply

Website

https://www.academictransfer.com/en/341089/postdoc-on-ev-mediated-crispr-cas9-d…

Contact

City

Utrecht

Website

http://www.uu.nl/

Street

Domplein 29

Postal Code

3512 JE

STATUS: EXPIRED